PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.W6M4V
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 327aa    MW: 35792.3 Da    PI: 5.2122
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.W6M4VgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.30.00016162189430
                  HHHHHHHH.HHHHHHHHHHHHHCTSCCC CS
          HLH   4 ahnerErr.RRdriNsafeeLrellPka 30 
                  + +erE++ RR++iN ++  L+el+P +
  Araip.W6M4V 162 KRKEREKKaRREKINARMKLLQELVPGC 189
                  457888766*****************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.4E-10155236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.51E-6156222No hitNo description
Gene3DG3DSA:4.10.280.103.1E-9157235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.493159217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.8E-5164223IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MEQATGVLRG STHDDVVLES IQFNEEIRGI MAPAPAPENA SSFTALLELP PTQAVELLHS  60
PDCPAAAREP PCHVSTNQKP YLLCSYGGNL TFPSNAALIE RAAKFSVFAG ENSPPEDAAR  120
LAPVAVSGVV KNEPQETDSN PSSTQGCVSD PAVDTKNQKT AKRKEREKKA RREKINARMK  180
LLQELVPGCN KVGFPFLVVI SGTALVLDEI INHVQSLQRQ VEFLSMKLAA VNPRIDFSLD  240
SLLATDGSSV MDSNLTSMAS PVMWPENLAN GNRQHFQQQW QFDAFHQPLW GREEANHNFM  300
TPEHSLLSYD SSANSASLQS NQLKMEL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969486.10.0PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH48
SwissprotQ8VZ025e-73BH048_ARATH; Transcription factor bHLH48
TrEMBLV7CVR71e-176V7CVR7_PHAVU; Uncharacterized protein
STRINGGLYMA03G29710.11e-166(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49852945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42300.11e-61bHLH family protein